PedcBioPortal for Integrated Childhood Cancer Genomics
PEDC
1
Point of Contact:  Ethan Cerami,  
  • cerami@jimmy.harvard.edu
  • Data Repository

    PedcBioPortal is an NIH-funded childhood cancer visualization tool modeled upon and partnered with the highly successful, adult-focused, cBioPortal, which was originally developed at Memorial Sloan-Kettering Cancer Center (MSK). PedcBioPortal provides access to high-level processed data types and supports the curation and cross-cancer integration of public, childhood cancer genomic information. PedcBioPortal contains data from 327 studies (as of July 2021). These were all aggregated into a single dataset.
    Resource Description
    Resource Type
    Data Repository
    Specialization
    Mixed Adult and Pediatric

    Data Update Date
    12/18/2023
    Data Content Type

    Clinical, Genomics/Omics
    Resource Tools
    Visualization Tools
    YES
    Analytic Tools
    YES

    datasets
    DATASET SUMMARIES (1)
    Case Disease Diagnosis
    Activated B-Cell Type (1); Acute Lymphoblastic Leukemia (964); Acute Lymphoid Leukemia (69); Acute Megakaryoblastic Leukemia (2); Acute Myeloid Leukemia (1,388); Acute Undifferentiated Leukemia (1); Adamantinomatous Craniopharyngioma (3); Adenoma (1); Adrenocortical Carcinoma (59); Alveolar Soft Part Sarcoma (1) ...

    Number of Cases
    15,796

    Case Sex
    Female (6,928); Male (8,190); Not Reported (678)

    Case Age At Diagnosis
    0 to 4 years (5,689); 5 to 9 years (2,944); 10 to 14 years (2,188); 15 to 19 years (1,599); 20 to 24 years (569); 25 to 29 years (642); 30 to 34 years (912); 35 to 39 years (1,253)

    Published In
  • https://doi.org/10.1158/2159-8290.CD-12-0095
  • Collection