PedcBioPortal for Integrated Childhood Cancer Genomics
PEDC
Data Resource:  PEDC
Point of Contact:  
Ethan Cerami,  
Collection

About This Dataset
Core Data Elements
Number of Cases
15,796
Case Sex
Female (6,928); Male (8,190); Not Reported (678)
Case Age At Diagnosis
0 to 4 years (5,689); 5 to 9 years (2,944); 10 to 14 years (2,188); 15 to 19 years (1,599); 20 to 24 years (569); 25 to 29 years (642); 30 to 34 years (912); 35 to 39 years (1,253)
Case Race
American Indian or Alaska Native (43); Asian (470); Black or African American (1,060); More Than One Race (15); Native Hawaiian or Other Pacific Islander (43); Other (226); White (8,348); Not Reported (4,856); Unknown (735)
Case Ethnicity
Hispanic or Latino (1,524); Not Hispanic or Latino (8,540); Not Reported (5,158); Unknown (574)
Case Disease Diagnosis
Activated B-Cell Type (1); Acute Lymphoblastic Leukemia (964); Acute Lymphoid Leukemia (69); Acute Megakaryoblastic Leukemia (2); Acute Myeloid Leukemia (1,388); Acute Undifferentiated Leukemia (1); Adamantinomatous Craniopharyngioma (3); Adenoma (1); Adrenocortical Carcinoma (59); Alveolar Soft Part Sarcoma (1); Anaplastic Astrocytoma (8); Anaplastic Ependymoma (1); Anaplastic Large Cell Lymphoma (4); Anaplastic Medulloblastoma (1); Anaplastic Pleomorphic Xanthoastrocytoma (1); Angiomatoid Fibrous Histiocytoma (2); Astrocytoma (4); Atypical Teratoid Rhabdoid Tumor (ATRT) (26); B Acute Lymphoblastic Leukemia/Lymphoma (5); B-Cell Acute Lymphoid Leukemia (63); B-Lymphoblastic Leukemia/Lymphoma (2,431); BCP-ALL (30); Benign Tumor (16); Bladder Cancer (10); Bladder Urothelial Carcinoma (2); Bone Cancer (161); Bone Marrow Cellularity, CTCAE (1); Bone Marrow Failure (1); Brain Lower Grade Glioma (239); Brainstem Glioma- Diffuse Intrinsic Pontine Glioma (13); Breast Cancer (216); Breast Invasive Carcinoma (73); Breast Sarcoma (7); Burkitt Lymphoma (2); Burkitt-Like Lymphoma With 11Q Aberration (1); Cavernoma (1); Cavernoma;Ependymoma (1); Cervical Adenocarcinoma (4); Cervical Cancer (46); Cervical Squamous Cell Carcinoma (34); Cervical Squamous Cell Carcinoma and Endocervical Adenocarcinoma (84); Cholangiocarcinoma (4); Chondroblastic OsteoSarcoma (2); Chordoma (9); Choroid Plexus Carcinoma (3); Choroid Plexus Papilloma (13); Choroid Plexus Tumor (1); Chronic Myelogenous Leukemia (3); Chronic Myeloid Leukemia (1); Clear Cell Sarcoma (14); CNS EFT-CIC (1); CNS Embryonal Tumor (2); CNS/Brain (2); Colon Adenocarcinoma (9); Colon Carcinoma (1); Colorectal Adenocarcinoma (16); Colorectal Cancer (135); Congenital Fibrosarcoma (1); Craniopharyngioma (25); Cutaneous Melanoma (60); Diffuse Astrocytic and Oligodendroglial Tumor (82); Diffuse Astrocytoma (9); Diffuse Glioma (72); Diffuse Intrinsic Pontine Glioma (1); Diffuse Large B-Cell Lymphoma (105); Diffuse Midline Glioma (20); Disseminated Juvenile Xanthogranuloma (1); Dysembryoplastic Neuroepithelial Tumor (DNET) (11); Dysgerminoma (1); Dysplasia/Gliosis (8); Embryonal RhabdomyoSarcoma (7); Embryonal Tumor (278); Endometrial Cancer (8); Endometrial Carcinoma (8); Ependymal Tumor (41); Ependymoblastoma (1); Ependymoma (75); Esophageal Carcinoma (3); Esophagogastric Adenocarcinoma (10); Esophagogastric Cancer (39); ETMR (3); ETP-ALL (6); Ewing Sarcoma (20); Extracranial Rhabdoid (3); Fibrolamellar Carcinoma (2); Follicular Thyroid Cancer (1); Fusion+ RMS (5); Fusion- RMS (5); Ganglioglioma (28); Ganglioneuroblastoma (41); Ganglioneuroma, Maturing Subtype or Ganglioneuroblastoma (3); Germ Cell Tumor (207); Germinal Center B-Cell Type (2); Germinoma (1); Glial-Neuronal Tumor (2); Glioblastoma (16); Glioblastoma Multiforme (15); Glioma (352); Gliomatosis Cerebri (1); Grade IV Glioblastoma (1); Head and Neck Cancer (26); Head and Neck Squamous Cell Carcinoma (23); Hemangioblastoma (3); Hepatobiliary Cancer (54); Hepatoblastoma (10); Hepatocellular Carcinoma (53); Heptocellular Carcinoma (1); High Grade Glial Neoplasma (1); High Grade Glioma (7); High Grade Sarcoma (1); High-Grade Glioma/Astrocytoma (87); Histiocytic and Dendritic Cell Neoplasms (6); Histiocytic Tumor (5); Hodgkin Lymphoma-Like PTLD (1); Immature Teratoma (2); Infantile Fibrosarcoma (2); Infiltrating Diffuse Astrocytoma (1); Infiltrating DIPG (1); Inflammatory Myofibroblastic Tumor (6); Intrahepatic Cholangiocarcinoma (1); Invasive Breast Carcinoma (58); Kidney Chromophobe (11); Kidney Renal Clear Cell Carcinoma (17); Kidney Renal Papillary Cell Carcinoma (11); Langerhans Cell Histiocytosis (5); Leukemia (1); Low-Grade Astrocytic Tumor (126); Low-Grade Glioma/Astrocytoma (158); Lung Adenocarcinoma (41); Lung Squamous Cell Carcinoma (2); Lymphadenitis (1); Lymphoid Neoplasm (1); Lymphoid Neoplasm Diffuse Large B-Cell Lymphoma (6); Malignant High-Grade Spindle Cell Sarcoma (1); Malignant Peripheral Nerve Sheath Tumor (MPNST) (4); Mature B-Cell Neoplasm (1); Medulloblastoma (553); Melanoma (74); Meningioma (25); Mesenchymal Non-Meningothelial Tumor (11); Mesothelioma (3); Metastatic Secondary Tumors (3); Metastatic Secondary Tumors; Neuroblastoma (2); Metastatic Tumors (2); Miscellaneous Neuroepithelial Tumor (5); Mixed Phenotype Acute Leukemia, B/Myeloid (1); Mixed Phenotype Acute Leukemia, T/Myeloid (1); MLL-ALL (10); Mucoepidermoid Carcinoma of the Lung (1); Myelodysplastic Syndromes (3); Myeloid Neoplasm (4); Nephroblastomatosis (1); Nerve Sheath Tumor (1); Nested Stromal Epithelial Tumor of the Liver (1); Neuroblastoma (1,396); Neurocytoma (1); Neuroendocrine Carcinoma (1); Neurofibroma/Plexiform (11); Neuronal and Mixed Neuronal-Glial Tumor (21); No Path Report (1); Nodular Lymphocyte-Predominant Hodgkin Lymphoma (1); Non-CNS Tumor (1); Non-Hodgkin Lymphoma (1); Non-Seminomatous Germ Cell Tumor (29); Non-Seminomatous Germ Cell Tumor, Predominantly Yolk Sac Type (1); Non-Seminomatous Mixed Germ Cell Tumor (1); Non-Small Cell Lung Cancer (6); Non-Tumor (1); Oligodendroglioma (32); Optic Nerve Glioma (1); OsteoSarcoma (128); Other (19); Ovarian Cancer (16); Ovarian Epithelial Tumor (8); Ovarian Serous Cystadenocarcinoma (8); Pancreatic Adenocarcinoma (4); Pancreatic Cancer (19); Papillary Thyroid Cancer (24); Paraganglioma (5); Peripheral Nervous System (1,162); Peripheral T-Cell Lymphoma (1); Ph+-ALL (3); Ph-Like ALL (17); Pheochromocytoma (45); Pheochromocytoma and Paraganglioma (53); PHGG (86); Pilocytic Astrocytoma (2); Pilomatrix Carcinoma (1); Pilomyxoid Astrocytoma (1); Pineal Germ Cell Tumor (1); Pineoblastoma (4); Plasma Cell Myeloma (8); Pleural Mesothelioma (1); Pleuropulmonary Blastoma (2); Plexiform Fibrohistiocytic Tumor (1); Plexiform Schwannoma (1); Pre-Cancerous Lesion (8); Primary CNS Lymphoma (1); Primary Mediastinal (Thymic) Large B-Cell Lymphoma (1); Prostate Cancer (3); Rectum Adenocarcinoma (3); Renal Cell Carcinoma (61); Renal Clear Cell Carcinoma (11); Renal Non-Clear Cell Carcinoma (11); Requested-Not Provided (6); Retinoblastoma (1); Rhabdoid Cancer (69); Rhabdoid Tumor (64); RhabdomyoSarcoma (16); Round Cell Sarcoma (1); Salivary Cancer (29); Salivary Gland Cancer (2); Sarcoma (36); Schwannoma (7); Seminoma (27); Sertoli-Leydig Cell Tumor (1); Shwachman-Diamond Syndrome (1); Sinonasal Adenocarcinoma (1); Skin Cancer, Non-Melanoma (1); Small Cell Carcinoma (1); Small Cell Lung Cancer (1); Small Round Blue Cell Tumor/ Ewing Sarcoma (1); Soft Tissue Sarcoma (32); Solid Pseudopapillary Neoplasm of the Pancreas (2); Stomach Adenocarcinoma (2); Subependymal Giant Cell Astrocytoma (4); Supratentorial or Spinal Cord Pnet (8); T Lymphoblastic Leukemia/Lymphoma (2); T-ALL (16); T-Cell Acute Lymphoid Leukemia (7); T-Lymphoblastic Leukemia/Lymphoma (8); Telangiectatic Osteosarcoma (1); Teratoma (6); Testicular Germ Cell Tumor (113); Therapy-Related Acute Myeloid Leukemia (1); Thymic Epithelial Tumor (5); Thymic Tumor (9); Thymoma (10); Thyroid Cancer (149); Thyroid Carcinoma (181); Thyroid Gland Papillary Carcinoma (3); Tumor of Cranial and Paraspinal Nerves (20); Tumor of Pineal Region (2); Tumors of Sellar Region (14); Undifferentiated Embryonal Sarcoma (1); Undifferentiated Malignant Neoplasm (1); Uterine Corpus Endometrial Carcinoma (3); Uveal Melanoma (5); Well-Differentiated Thyroid Cancer (51); Wilms Tumor (798); Not Reported (1,644)
Case Tumor Site
Abdomen (153); Abdominal mass (2); Adrenal Gland (381); Anterior Mediastinum (9); Antrum (4); Aortic Body and Other Paraganglia (4); Arm (1); Arm/Hand, Arm (1); Arm/Hand, Humerus (3); Arm/Hand, Radius (1); Arm/Hand,Humerus (1); Ascending Colon (7); Autonomic Nervous System (2); Back (2); Back, Trunk Posterior Upper (Except Midline) (2); Back, Trunk Upper Midline (1); Basal Ganglia (6); Basal Ganglia; Brain Stem (2); Basal Ganglia; Optic Pathway; Suprasellar/Hypothalamic/Pituitary; Thalamus (1); Basal Ganglia; Other (1); Basal Ganglia;Occipital Lobe;Parietal Lobe;Temporal Lobe (1); Basal Ganglia;Optic Pathway;Temporal Lobe;Ventricles (1); Basal Ganglia;Pineal Gland;Thalamus (1); Basal Ganglia;Thalamus (2); Basal Ganglia;Ventricles (1); Base of Tongue (2); Bilateral (7); Bilateral Adrenal Gland (1); Bilateral Thalmus (1); Bile Duct (5); Bladder (6); Body (2); Body of Pancreas (1); Bone (16); Bone Marrow (55); Bone+Liver (1); Bone+Other (3); Bone+Other+Soft Tissue (1); Bone+Soft Tissue (2); Bones of Skull and Face and Associated Joints (2); Bowel (1); Bowel+Kidney (1); Bowel+Peritoneum (1); Brain (87); Brain Stem (81); Breast (74); Buccal Mucosa (1); Buttocks (4); Cardia (2); Cecum (10); Central Nervous System (CNS) (73); Central Nervous System/Brain (9); Central Nervous System/Brain+Liver (1); Cerebellum (29); Cerebellum/Posterior Fossa (313); Cerebrum (228); Cervical (84); Cervical Intraspil (1); Cervix Uteri (84); Chest (1); Chest - Lung/Pleura (1); Chest Wall (11); Chest, Trunk Anterior Upper (Except Nipple & Midline) (1); Choroid (7); Choroid|CIlium (2); Clavicle (3); Colon (2); Connective, Subcutaneous and Other Soft Tissues (30); Corpus Uteri (1); Cortex of Adrenal Gland (30); Cranial Nerves (3); Descending Colon (7); Distal Femur (11); Distal Tibia (1); Distant Metastasis (1); Distant Metastasis|Extremities (2); Dorsal Vertebra (3); Endometrium (8); Esophagus (3); Esophagus/Stomach+Liver (1); Ethmoid (1); Ethmoid Sinus (1); Extra-Adrenal Gland (5); Extremities (18); Extremities|Primary (2); Extremities|Regional Cutaneous or Subcutaneous Tissue (2); Extremities|Regional Lymph Node (8); Eye (4); Face (1); Femur (27); Fibula (8); Floor of Mouth (1); Foot/Ankle (1); Forearm (1); Frontal Lobe (100); Frontal Lobe+Temporal Lobe (1); Frontal Lobe; Meninges/Dura (1); Frontal Lobe; Meninges/Dura; Parietal Lobe; Spinal Cord- Cervical; Spinal Cord- Lumbar/Thecal Sac; Spinal Cord- Thoracic; Temporal Lobe; Ventricles (1); Frontal Lobe; Occipital Lobe (1); Frontal Lobe; Occipital Lobe; Temporal Lobe (2); Frontal Lobe; Other (4); Frontal Lobe; Parietal Lobe (5); Frontal Lobe; Parietal Lobe; Temporal Lobe (2); Frontal Lobe; Spine (1); Frontal Lobe; Temporal Lobe (2); Frontal Lobe; Thalamus; Ventricles (1); Frontal Lobe;Occipital Lobe;Parietal Lobe (2); Frontal Lobe;Parietal Lobe (11); Frontal Lobe;Parietal Lobe;Temporal Lobe (3); Frontal Lobe;Suprasellar/Hypothalamic/Pituitary;Thalamus;Ventricles (1); Frontal Lobe;Temporal Lobe (4); Gastric Antrum (1); Gluteus Muscle (2); Head and Neck (19); Head of Pancreas (1); Head or Neck (1); Head, Face or Neck (10); Hemispheric (52); Hepatic Flexure (6); Hipbone (10); Hippocampus; Other (1); Hippocampus;Other (1); Hippocampus;Temporal Lobe (1); Humerus (6); Ilium (6); Intra-Abdominal (4); Intrahepatic Bile Duct (2); Ischium Pubis (6); Kidney (353); Larynx (4); Left (11); Left Lower Inner Quadrant (1); Left Upper Inner Quadrant (5); Left Upper Inner Quadrant|Left Upper Outer Quadrant (1); Left Upper Outer Quadrant (6); Left Upper Outer Quadrant|Left (2); Left Upper Outer Quadrant|Left Lower Outer Quadrant|Left (1); Leg (1); Leg, Lower Anterior (1); Leg, Lower Posterior (1); Leg/Foot (1); Leg/Foot, Femur (32); Leg/Foot, Femur (8); Leg/Foot, Fibula (7); Leg/Foot, Fibula (1); Leg/Foot, Foot (1); Leg/Foot, Leg (6); Leg/Foot, Pelvis (2); Leg/Foot, Tibia (17); Leg/Foot, Tibia (4); Liver (99); Long Bones of Lower Limb and Associated Joints (2); Lower Extremity (1); Lower Extremity - Foot/Ankle (1); Lower Extremity - Thigh/Knee (5); Lower Leg (2); Lower Lip (1); Lower third of esophagus (3); Lower-inner Quadrant of Breast (1); Lumbar Vertebra (3); Lung (44); Lung+Other (1); Lung+Pleura (1); Lymph Node (5); Lymph Nodes of Axilla or Arm (2); Lymph Nodes of Head, Face and Neck (7); Lymph Nodes of Inguinal Region or Leg (1); Lymphoid (144); Major Salivary Gland (2); Maxilla (4); Mediastinum (42); Mediastinum and Lungs (1); Medulla of Adrenal Gland (25); Meninges/Dura (4); Meninges/Dura;Optic Pathway (1); Meninges/Dura;Parietal Lobe;Skull;Temporal Lobe (1); Meninges/Dura;Skull (2); Metacarpal (1); Metatarsal (1); Midline (34); Myeloid (18); Nasopharynx (2); Neck (6); Nervous System (2); Occipital Lobe (11); Occipital Lobe,Parietal Lobe,Temporal Lobe (1); Occipital Lobe,Temporal Lobe (2); Occipital Lobe; Parietal Lobe (7); Occipital Lobe; Parietal Lobe; Temporal Lobe (3); Occipital Lobe; Temporal Lobe (2); Occipital Lobe;Parietal Lobe (2); Occipital Lobe;Parietal Lobe;Skull (1); Occipital Lobe;Temporal Lobe (2); Occipital Mass (1); Optic Pathway (7); Optic Pathway,Suprasellar/Hypothalamic/Pituitary (1); Optic Pathway; Suprasellar/Hypothalamic/Pituitary (3); Optic Pathway; Temporal Lobe; Ventricles (1); Optic Pathway;Other (1); Optic Pathway;Pineal Gland;Suprasellar/Hypothalamic/Pituitary (1); Optic Pathway;Suprasellar/Hypothalamic/Pituitary (5); Optic Pathway;Suprasellar/Hypothalamic/Pituitary;Temporal Lobe (2); Optic Pathway;Suprasellar/Hypothalamic/Pituitary;Ventricles (1); Optic Pathway;Temporal Lobe (1); Oral Cavity (3); Oral Tongue (6); Orbit (2); Orbital Cavity (2); Oropharynx (1); Other (76); Other+Ovary/Fallopian Tube (1); Other+Soft Tissue (1); Ovary (17); Ovary/Fallopian Tube (4); Overlapping Lesion of Eye and Adnexa (1); Overlapping Lesion of Lip, Oral Cavity and Pharynx (2); Overlapping Lesion of Retroperitoneum (8); Palate (1); Pancreas (4); Parasacral (1); Paraspinal (1); Paraspinal Mass (1); Paratesticular (1); Parietal Lobe (47); Parietal Lobe; Temporal Lobe (5); Parietal Lobe; Temporal Lobe; Ventricles (1); Parietal Lobe; Ventricles (1); Parietal Lobe;Temporal Lobe (7); Parietal Lobe;Temporal Lobe;Ventricles (1); Parietal Lobe;Ventricles (1); Parotid Gland (10); Pelvic Lymph Nodes Hypogastric Lymph Node Ilium (1); Pelvic Soft Tissue (2); Pelvis (21); Penis/Scrotum (1); Perineum (1); Peripheral Nerves and Autonomic Nervous System (15); Peripheral Nervous System (1); Peritoneum (7); Pineal Gland (8); Pineal Gland;Spinal Cord- Lumbar/Thecal Sac;Spinal Cord- Thoracic (1); Pineal Gland;Ventricles (1); Plantar Foot (Except Toes) (1); Pleura (4); Pons/Brainstem (51); Posterior Fossa (1); Posterior Fossa, Cerebellum (1); Posterior Mediastinum (36); Prostate (1); Proximal Colon (1); Proximal Humerus/Bone Marrow (1); Proximal Tibia (3); Proximal Ulna (1); Pubic Bone (2); Radius (1); Rectosigmoid (21); Rectum (36); Regional Cutaneous or Subcutaneous Tissue (3); Regional Lymph Node (4); Regional Lymph Node|Trunk (6); Renal Pelvis (2); Retroperitoneum (107); Rib (14); Rib, Sternum, Clavicle and Associated Joints (1); Right (4); Right Lower Inner Quadrant (1); Right Lower Outer Quadrant (2); Right Lower Outer Quadrant|Right (1); Right Occipital (1); Right Parietal Lobe (1); Right Upper Inner Quadrant (5); Right Upper Inner Quadrant|Right Upper Outer Quadrant (1); Right Upper Outer Quadrant (9); Right Upper Outer Quadrant|Right (1); Sacrum (3); Salivary Gland (1); Scalp (2); Scapula (6); Shoulder (3); Sigmoid Colon (43); Sinonasal (2); Skin (64); Skull (12); Skull; Spinal Cord- Cervical (1); Skull; Temporal Lobe (1); Soft Tissue (16); Spinal Cord (2); Spinal Cord- Cervical (14); Spinal Cord- Cervical; Spinal Cord- Lumbar/Thecal Sac; Spinal Cord- Thoracic (1); Spinal Cord- Cervical; Spinal Cord- Lumbar/Thecal Sac; Spinal Cord- Thoracic; Suprasellar/Hypothalamic/Pituitary (1); Spinal Cord- Cervical; Spinal Cord- Thoracic (1); Spinal Cord- Cervical;Spinal Cord- Lumbar/Thecal Sac;Spinal Cord- Thoracic (1); Spinal Cord- Cervical;Spinal Cord- Thoracic (2); Spinal Cord- Lumbar/Thecal Sac (21); Spinal Cord- Lumbar/Thecal Sac,Spinal Cord- Thoracic (1); Spinal Cord- Lumbar/Thecal Sac; Spinal Cord- Thoracic (2); Spinal Cord- Lumbar/Thecal Sac;Spinal Cord- Thoracic (3); Spinal Cord- Lumbar/Thecal Sac;Spinal Cord- Thoracic;Ventricles (2); Spinal Cord- Thoracic (7); Spinal Cord- Thoracic; Spine (1); Spinal Meninges (2); Spine (5); Splenic Flexure (2); Stomach (1); Sublingual Gland (1); Submandibular Gland (2); Superficial Trunk - Flank (1); Suprarenal Gland (3); Suprasellar/Hypothalamic/Pituitary (65); Suprasellar/Hypothalamic/Pituitary; Ventricles (2); Suprasellar/Hypothalamic/Pituitary;Ventricles (1); Supratentorial, Frontal Lobe (62); Supratentorial, Not Otherwise Specified (1); Supratentorial, Occipital Lobe (3); Supratentorial, Parietal Lobe (14); Supratentorial, Temporal Lobe (36); Sylvian Fissure (1); Talus (1); Temporal Lobe (98); Temporal Lobe; Ventricles (2); Temporal Lobe;Thalamus;Ventricles (1); Testis (351); Thalamus (29); Thalamus;Ventricles (1); Thigh (8); Thigh, Anterior (1); Thigh/Knee (1); Thorax (27); Thymus (11); Thyroid Gland (315); Tibia (20); Tongue (15); Tonsil (6); Trachea (1); Transverse Colon (10); Trunk (14); Ul (1); Upper Extremity - Upper Arm/Elbow (1); Upper Lobe, Lung (3); Uterus (8); Ventricle (1); Ventricles (66); Ventricular Mass (1); Vertebral Body (3); Vertebral Column (Excludes Sacrum and Coccyx C41.4) (2); Vulva/Vagina (2); Wall (1); Not Reported (10,202); Unknown (340)
Additional Data Elements
DATA REPOSITORY
Grant Information
R21CA135870
A Computational Platform for Analyzing and Visualizing Integrated TCGA Data
U24CA143840
MSKCC Center for Translational Cancer Genomic Analysis
PROGRAM ID
RFA-CA-08-005
RFA-CA-09-010
Published In
https://doi.org/10.1126/scisignal.2004088;https://doi.org/10.1158/2159-8290.CD-12-0095
Charts
Male (8,190); Female (6,928); Not Reported (678)
8,190Male