PDXNet Portal PDMR Data
PDXNet
Data Resource:  PDXNet
Point of Contact:  
PDXNet Steering Committee,  
Xenograft

About This Dataset
Core Data Elements
Number of Cases
85
Case Sex
Female (55); Male (30)
Case Age At Diagnosis
10 to 14 years (2); 15 to 19 years (5); 20 to 24 years (6); 25 to 29 years (13); 30 to 34 years (19); 35 to 39 years (40)
Case Race
Asian (1); Black or African American (14); Native Hawaiian or Other Pacific Islander (1); White (53); Not Reported (16)
Case Ethnicity
Hispanic or Latino (3); Not Hispanic or Latino (67); Not Reported (15)
Case Disease Diagnosis
Adenocarcinoma (16); Adenocarcinoma, NOS (1); Adrenocortical carcinoma (1); Alveolar rhabdomyosarcoma (2); Alveolar soft part sarcoma (1); Cervical cancer, NOS (1); Cholangiocar.- intra/extrahepatic (3); Colorectal cancer, NOS (2); Embryonal rhabdomyosarcoma (1); Ewing sarcoma/Peripheral PNET (2); Female reprod. system cancer, NOS (1); Fibrosarcoma (1); Gastrointestinal stromal tumor (3); Head & neck cancer, NOS (1); Invasive breast carcinoma (7); Islet cell tumors (1); Leiomyosarcoma (2); Lip/oral cavity squam. cell car. (1); Liposarcoma (1); Malig. periph. nerve sheath tum. (3); Melanoma (6); Nasopharyngeal carcinoma (1); Neuroblastoma (1); Neuroendocrine cancer, NOS (1); Non-Rhabdo. soft tissue sarcoma (5); Osteosarcoma (3); Ovarian epithelial cancer (1); Papillary thyroid carcinoma (2); Pharyngeal squam. cell carcinoma (1); Renal cell carcinoma, NOS (1); Salivary gland cancer (1); Soft tissue neoplasm, NOS (4); Squamous cervical cancer (1); Synovial sarcoma (4); Testicular nonseminomat. GCT, NOS (1); Urothelial/bladder cancer, NOS (1)
Case Tumor Site
Breast (7); Digestive/Gastrointestinal (24); Endocrine and Neuroendocrine (5); Genitourinary (2); Germ Cell (1); Gynecologic (4); Head and Neck (5); Musculoskeletal (27); Neurologic (1); Respiratory/Thoracic (2); Skin (6); Unknown (1)
Number of Samples
553
Sample Assay Method
RNA Sequencing (517); Whole Exome Sequencing (36)
Sample Is Xenograft
Yes (481); No (72)
Additional Data Elements
DATA REPOSITORY
Grant Information
U24CA224067
PDXNet Data Commons and Coordinating Center
U54CA224070
Rational Approaches to Melanoma Therapy
U54CA224076
PDX Trial Center for Breast Cancer Therapy
U54CA224083
Washington University PDX Development and Trial Center
U54CA283759
University of Pennsylvania Patient-derived Xenograft Development and Trials Center
U54CA283762
United for Health Equity - Living PDX Program (U4HELPP)
U54CA283766
University of California and UT Southwestern D-PDTC
Published In
https://doi.org/10.1093/narcan/zcac014;https://doi.org/10.1186/s12967-021-02936-w
Charts
Female (55); Male (30)
55Female